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relabeling, reshuffling (Hippo should be first)
use de wikipedia style sheet for boxes
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== Hippo ==
== Hippo ==
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* [[Simulations]]
* [[Simulations]]
* [[Analysis]]
* [[Analysis]]
* [[Graphical interface]]
* [[Graphical interface]]
* [[Files and features]]
* [[Files and features]]
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== Methods ==
== Methods ==
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* [[Molecular dynamics]]
* [[Molecular dynamics]]
* [[Monte Carlo]]
* [[Monte Carlo]]
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* [[Solvents]]
* [[Solvents]]
* [[Membranes]]
* [[Membranes]]
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== Simulation protocols ==
== Simulation protocols ==
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* [[Globular proteins]] in solvent
* [[Globular proteins]] in solvent
* [[Membrane proteins]] in membrane and solvent
* [[Membrane proteins]] in membrane and solvent
* [[Free energy calculations]]
* [[Free energy calculations]]
* [[Transition path sampling]]
* [[Transition path sampling]]
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== Visualization ==
== Visualization ==
<div class="inhalt">
* Visualization [[Visualization software|software]]
* Visualization [[Visualization software|software]]
* Visualization [[Visualization tutorial|tutorial]] with [[VMD]]
* Visualization [[Visualization tutorial|tutorial]] with [[VMD]]
* [[Movie tutorial]]
* [[Movie tutorial]]
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Revision as of 18:05, 29 June 2008

This Wiki discusses biomolecular simulations with Hippo and other molecular dynamics/Monte Carlo codes. It serves as a repository for the community and complements the forums.

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Simulation protocols

Visualization